se_transcripts: Extract single-exon transcripts
In monahton/GencoDymo: Data Extraction and Manipulation from the GENCODE Database
Description
Usage
Arguments
Value
See Also
Examples
Description
This function takes a gtf file from GENCODE and returns a data frame in the R Global Environment containing a column of the transcripts id of the single-exon transcripts.
Usage
1
se_transcripts(input)
Arguments
input
The name of the downloaded gtf file from GENCODE website
Value
A data frame of the transcript ids of single-exon transcripts
See Also
Examples
1
2
df <- load_gtf("gencode.v27.lncRNAs.gtf")
se_transcripts(df)
monahton/GencoDymo documentation built on Nov. 29, 2021, 9:16 a.m.
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Description Usage Arguments Value See Also Examples
Description
This function takes a gtf file from GENCODE and returns a data frame in the R Global Environment containing a column of the transcripts id of the single-exon transcripts.
Usage
1 | se_transcripts(input)
|
Arguments
input |
The name of the downloaded gtf file from GENCODE website |
Value
A data frame of the transcript ids of single-exon transcripts
See Also
Examples
1 2 | df <- load_gtf("gencode.v27.lncRNAs.gtf")
se_transcripts(df)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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