genes_freq: Extract numbers of genes containing single or multiple...

Description Usage Arguments Value See Also Examples

View source: R/freq.R

Description

This function takes a data frame of annotations provided by GENCODE as input. It calculates the number of different transcripts of a gene. The output is a data frame containing the number of genes having 1,2,3... or several isoforms and their percentage.

Usage

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genes_freq(input)

Arguments

input

The name of the downloaded gtf file from GENCODE website

Value

A data frame of number of genes and their percentage

See Also

trans_freq

Examples

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df <- load_gtf("gencode.v27.lncRNAs.gtf")
genes_freq(df)

monahton/GencoDymo documentation built on Nov. 29, 2021, 9:16 a.m.