calculateBE: Tranform a Seqeuence into Binary Encoding (BE)
In mrbakhsh/HPiP: Host-Pathogen Interaction Prediction
calculateBE R Documentation
Tranform a Seqeuence into Binary Encoding (BE)
Description
This function transform each residue in a peptide
into 20 coding values.
Usage
calculateBE(x)
Arguments
x
A data.frame containing gene/protein names and their
fasta sequences.
Details
calculateBE
Value
A length 400 named vector for the data input.
Author(s)
Matineh Rahmatbakhsh, matinerb.94@gmail.com
References
Al-Barakati, H. J., Saigo, H., and Newman, R. H. (2019).
RF-GlutarySite: a random forest based predictor for glutarylation sites.
Mol. Omi. 15, 189–204.
mrbakhsh/HPiP documentation built on March 28, 2023, 4:35 p.m.
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| calculateBE | R Documentation |
Tranform a Seqeuence into Binary Encoding (BE)
Description
This function transform each residue in a peptide into 20 coding values.
Usage
calculateBE(x)
Arguments
x |
A data.frame containing gene/protein names and their fasta sequences. |
Details
calculateBE
Value
A length 400 named vector for the data input.
Author(s)
Matineh Rahmatbakhsh, matinerb.94@gmail.com
References
Al-Barakati, H. J., Saigo, H., and Newman, R. H. (2019). RF-GlutarySite: a random forest based predictor for glutarylation sites. Mol. Omi. 15, 189–204.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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