calculateCTDD: Calculate CTD Descriptors - Distribution (D)

In mrbakhsh/HPiP: Host-Pathogen Interaction Prediction

Calculate CTD Descriptors - Distribution (D)

Description

This function calculates Distribution (D) descriptor for data input.

Usage

calculateCTDD(x)

Arguments

x	A data.frame containing gene/protein names and their fasta sequences.

Details

calculateCTDD

Value

A length 105 named vector for the data input.

Author(s)

Matineh Rahmatbakhsh, [e-mail]

References

Dubchak, I., Muchnik, I., Holbrook, S. R., and Kim, S.-H. (1995). Prediction of protein folding class using global description of amino acid sequence.Proc. Natl. Acad. Sci. 92, 8700–8704.

See Also

See calculateCTDC and calculateCTDT for Composition and Transition descriptors.

Examples

data(UP000464024_df)
x_df <- calculateCTDD(UP000464024_df)
head(x_df, n = 1L)

mrbakhsh/HPiP documentation built on March 28, 2023, 4:35 p.m.