rna_reformat: rna_reformat
In mskilab/casereport: casereport: Whole-genome + transcription based report for cancer genomes
rna_reformat R Documentation
rna_reformat
Description
preprocess kallisto/salmon raw tsv files for downstream analysis
Usage
rna_reformat(kallisto.fname, pair = NULL, gngt.fname = NULL)
Arguments
kallisto.fname
(character) path to kallisto/salmon output
pair
(character) id
gngt.fname
(character) gencode gTrack file name
Value
data.table with columns gene, pair
mskilab/casereport documentation built on Oct. 19, 2022, 3 a.m.
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| rna_reformat | R Documentation |
rna_reformat
Description
preprocess kallisto/salmon raw tsv files for downstream analysis
Usage
rna_reformat(kallisto.fname, pair = NULL, gngt.fname = NULL)
Arguments
kallisto.fname |
(character) path to kallisto/salmon output |
pair |
(character) id |
gngt.fname |
(character) gencode gTrack file name |
Value
data.table with columns gene, pair
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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