Files in nlmixrdevelopment/nlmixr
Nonlinear Mixed Effects Models in Population Pharmacokinetics and Pharmacodynamics

.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
PosterACoP2016.pdf PosterACoP2017.pdf PosterPAGE2017.pdf R/000.R R/Bolus_1CPT.R R/Infusion_1CPT.R R/Oral_1CPT.R R/RcppExports.R R/RcppManualExports.R R/Ruser_function_ex.R R/Wang2007.R
R/acop7-data.R
R/bolus2cptmm.R R/bolus_1CPTMM.R R/bolus_2CPT.R R/bounds.R R/dataConvert.R R/foceiFit.R R/gauss.quad.R R/gnlmm.R R/gnlmm2.R R/instant.stan.extension.R R/invgaussian.R R/metabolite.R R/nlme_fit.R R/nlme_fit_gen.R R/nlmixr.R R/npde.R R/pkpars.R R/pump.R R/rats.R R/reexports.R R/saem_fit.R R/saem_fit_aux.R R/simulate.R R/sourceCppFunction.R R/theo_md.R R/theo_sd.R R/ui.R R/utils.R R/validate.R R/vpc.R R/vpc.nlme.R R/vpc.saemFit.R R/vpc.ui.R README.md
appveyor.yml
build/icon_red.ico
build/install.R
build/nlmixr-header.bmp
build/nlmixr-header.png
build/nlmixr-welcome.bmp
build/nlmixr-welcome.png
build/nsis.R build/refresh.R build/test_install.R
data/Bolus_1CPT.rda
data/Bolus_1CPTMM.rda
data/Bolus_2CPT.rda
data/Bolus_2CPTMM.rda
data/Infusion_1CPT.rda
data/Oral_1CPT.rda
data/Wang2007.rda
data/invgaussian.rda
data/metabolite.rda
data/pump.rda
data/rats.rda
data/theo_md.rda
data/theo_sd.rda
inst/COPYRIGHT
inst/Installing_nlmixr.pdf
inst/Installing_nlmixr.rtf
inst/THANKS
inst/TODOs.txt
inst/bak/DESCRIPTION
inst/bak/NAMESPACE
inst/codegen.py
inst/comparison of NONMEM_nlmixr Sparse samples.pdf
inst/examples/ACoP7poster/Bolus_1CPT.csv
inst/examples/ACoP7poster/Bolus_1CPTMM.csv
inst/examples/ACoP7poster/Bolus_2CPT.csv
inst/examples/ACoP7poster/Bolus_2CPTMM.csv
inst/examples/ACoP7poster/Infusion_1CPT.csv
inst/examples/ACoP7poster/Infusion_1CPTMM.csv
inst/examples/ACoP7poster/Infusion_2CPT.csv
inst/examples/ACoP7poster/Infusion_2CPTMM.csv
inst/examples/ACoP7poster/Oral_1CPT.csv
inst/examples/ACoP7poster/Oral_1CPTMM.csv
inst/examples/ACoP7poster/Oral_2CPT.csv
inst/examples/ACoP7poster/Oral_2CPTMM.csv
inst/examples/ACoP7poster/PosterACoP2016.pdf inst/examples/ACoP7poster/nlmixr_examples_170102.R
inst/examples/LiveDemo/Infusion_1CPTMM.csv
inst/examples/LiveDemo/Oral_1CPT.csv
inst/examples/LiveDemo/nlmixr LiveDemo 161023.R inst/examples/LiveDemo/print.summary.lme.R inst/examples/LiveDemo/summary.SAEMFit.R inst/examples/ch9_ex.R
inst/examples/invgaussian.txt
inst/examples/lin_cmt_ex1.R inst/examples/lin_cmt_ex2.R
inst/examples/metabolite.txt
inst/examples/ode_ex1.R inst/examples/ode_ex2.R inst/examples/saem_theo1.R
inst/examples/theo_inf.txt
inst/examples/theo_md.txt
inst/examples/theo_sd.dat
inst/include/generic_ode_interface_template.txt
inst/include/generic_ode_interface_template_cov.txt
inst/include/lin_cmt.hpp
inst/include/neldermead.hpp
inst/include/nlmixr_types.h
inst/include/saem_class_rcpp.hpp
inst/nlmixr-intro.pdf
inst/quadrule.diff
inst/revision.txt
logo.png
man-roxygen/uif.R man-roxygen/w2007.R man/Bolus_1CPT.Rd man/Bolus_1CPTMM.Rd man/Bolus_2CPT.Rd man/Bolus_2CPTMM.Rd man/Infusion_1CPT.Rd man/Oral_1CPT.Rd man/Wang2007.Rd man/addCwres.Rd man/addNpde.Rd man/as.focei.Rd man/as.nlme.Rd man/as.saem.Rd man/bootdata.Rd man/calcCov.Rd man/cholSE.Rd man/configsaem.Rd man/constructLinCmt.Rd man/coxBox.Rd man/dot-collectWarnings.Rd man/dynmodel.Rd man/dynmodel.mcmc.Rd man/focei.eta.Rd man/focei.theta.Rd man/foceiControl.Rd man/foceiFit.Rd man/foceiFitCpp_.Rd man/frwd_selection.Rd man/gauss.quad.Rd man/gen_saem_user_fn.Rd man/getOMEGA.Rd man/gnlmm.Rd man/ini.Rd man/instant.stan.extension.Rd man/invgaussian.Rd man/lin_cmt.Rd man/lincmt.Rd man/metabolite.Rd man/model.Rd man/nlmeModList.Rd man/nlme_gof.Rd man/nlme_lin_cmpt.Rd man/nlme_ode.Rd man/nlmixr.Rd man/nlmixrAugPred.Rd man/nlmixrBounds.Rd man/nlmixrBounds.eta.names.Rd man/nlmixrBounds.focei.upper.lower.Rd man/nlmixrData.Rd man/nlmixrForget.Rd man/nlmixrLogo.Rd man/nlmixrPred.Rd man/nlmixrPrint.Rd man/nlmixrSim.Rd man/nlmixrUI.Rd man/nlmixrUI.focei.fixed.Rd man/nlmixrUI.focei.inits.Rd man/nlmixrUI.nlme.specs.Rd man/nlmixrUI.nlme.var.Rd man/nlmixrUI.nlmefun.Rd man/nlmixrUI.rxode.pred.Rd man/nlmixrUI.saem.ares.Rd man/nlmixrUI.saem.bres.Rd man/nlmixrUI.saem.distribution.Rd man/nlmixrUI.saem.eta.trans.Rd man/nlmixrUI.saem.fit.Rd man/nlmixrUI.saem.fixed.Rd man/nlmixrUI.saem.init.Rd man/nlmixrUI.saem.init.omega.Rd man/nlmixrUI.saem.init.theta.Rd man/nlmixrUI.saem.log.eta.Rd man/nlmixrUI.saem.model.Rd man/nlmixrUI.saem.model.omega.Rd man/nlmixrUI.saem.res.mod.Rd man/nlmixrUI.saem.res.name.Rd man/nlmixrUI.saem.theta.name.Rd man/nlmixrUI.theta.pars.Rd man/nlmixrUILinCmt.Rd man/nlmixrValidate.Rd man/nlmixrVersion.Rd man/nlmixr_fit.Rd man/nlmixrfindLhs.Rd man/nmDataConvert.Rd man/nmsimplex.Rd man/nmxInclude.Rd man/plot.dyn.ID.Rd man/plot.dyn.mcmc.Rd man/plot.nlmixrFitData.Rd man/plot.saemFit.Rd man/prediction.Rd man/print.dyn.ID.Rd man/print.dyn.mcmc.Rd man/print.gnlmm.fit.Rd man/print.nlmixrUI.Rd man/print.saemFit.Rd man/pump.Rd man/rats.Rd man/reexports.Rd man/residuals.nlmixrFitData.Rd man/saem.cleanup.Rd man/saem.fit.Rd man/saemControl.Rd man/sqrtm.Rd man/summary.dyn.ID.Rd man/summary.dyn.mcmc.Rd man/summary.saemFit.Rd man/tableControl.Rd man/theo_md.Rd man/theo_sd.Rd man/traceplot.Rd man/vpc.Rd man/vpc_nlmixr_nlme.Rd man/vpc_saemFit.Rd man/vpc_ui.Rd man/yeoJohnson.Rd
src/Makevars
src/PKPDLib_WW.h
src/RcppExportMod.cpp
src/RcppExports.cpp
src/chkSolved.c
src/evaluate.h
src/init.c
src/inner.cpp
src/jj.c
src/jj.g.d_parser.c
src/jj_new.c
src/lbfgsR.c
src/lin_cmt.h
src/merge3.c
src/neldermead.cpp
src/ode_cmt1.cpp
src/resid.cpp
src/rprintf.c
src/slice.cpp
tests/testthat.R
tests/testthat/Infusion_1CPT.csv
tests/testthat/Infusion_1CPTMM.csv
tests/testthat/Infusion_2CPT.csv
tests/testthat/Infusion_2CPTMM.csv
tests/testthat/Oral_1CPTMM.csv
tests/testthat/Oral_2CPT.csv
tests/testthat/Oral_2CPTMM.csv
tests/testthat/fn.txt
tests/testthat/test-bounds.R tests/testthat/test-focei-inner.R tests/testthat/test-focei-outer.R tests/testthat/test-focei-solved-inner.R tests/testthat/test-focei-solved-outer.R tests/testthat/test-focei-wang2007.R tests/testthat/test-model01.R tests/testthat/test-model02.R tests/testthat/test-model03.R tests/testthat/test-model04.R tests/testthat/test-model09.R tests/testthat/test-model10.R tests/testthat/test-model11.R tests/testthat/test-model12.R tests/testthat/test-model13.R tests/testthat/test-model14.R tests/testthat/test-model15.R tests/testthat/test-model20.R tests/testthat/test-model21.R tests/testthat/test-model22.R tests/testthat/test-model23.R tests/testthat/test-model24.R tests/testthat/test-model25.R tests/testthat/test-model26.R tests/testthat/test-model29.R tests/testthat/test-model30.R tests/testthat/test-model31.R tests/testthat/test-model32.R tests/testthat/test-model33.R tests/testthat/test-model34.R tests/testthat/test-model35.R tests/testthat/test-model40.R tests/testthat/test-model41.R tests/testthat/test-model42.R tests/testthat/test-model46.R tests/testthat/test-model47.R tests/testthat/test-model48.R tests/testthat/test-model49.R tests/testthat/test-model54.R tests/testthat/test-model55.R tests/testthat/test-model56.R tests/testthat/test-model60.R tests/testthat/test-model61.R tests/testthat/test-model62.R tests/testthat/test-model63.R tests/testthat/test-model68.R tests/testthat/test-model69.R tests/testthat/test-model70.R tests/testthat/test-nonmem-convert.R tests/testthat/test-ui-bad-models.R tests/testthat/test-ui-good-models.R tests/testthat/test-ui-pred-err.R tests/testthat/test-ui-saem.R vignettes/VignetteDemo.R
vignettes/cwres_vs_pred.png
vignettes/dv_vs_ipred.png
vignettes/dv_vs_pred.png
vignettes/etas.png
vignettes/fitplot.png.pdf
vignettes/fitplots.png
vignettes/igab.png
vignettes/ind_plots.png
vignettes/installing_nlmixr.Rmd
vignettes/iter.png
vignettes/iwres_vs_pred.png
vignettes/logo.png
vignettes/nlmixr_RxODE_shinyMixR_combo.jpg
vignettes/pmetab.png
vignettes/running_nlmixr.Rmd
vignettes/theo_inf.txt
vignettes/theo_sd.dat
vignettes/theo_sd.png
nlmixrdevelopment/nlmixr documentation built on Oct. 19, 2018, 11:10 a.m.