API for oliviaAB/sismonr
Simulation of in Silico Multi-Omic Networks
| Global functions | |
|---|---|
| .get_seed | Source code |
| .onLoad | Source code |
| addComplex | Man page Source code |
| addEdge | Man page Source code |
| addGene | Man page Source code |
| callJuliaStochasticSimulation | Man page Source code |
| checkColourPalette | Source code |
| checkJuliaModules | Man page Source code |
| checkJuliaVersion | Man page Source code |
| checkLabels | Source code |
| check_julia | Man page Source code |
| chooseColourPalette | Source code |
| createEmptyMultiOmicNetwork | Man page Source code |
| createGenes | Man page Source code |
| createInSilicoPopulation | Man page Source code |
| createInSilicoSystem | Man page Source code |
| createIndividual | Man page Source code |
| createMultiOmicNetwork | Man page Source code |
| createRegulatoryNetwork | Man page Source code |
| createStochSystem | Man page Source code |
| createVariants | Man page Source code |
| df2list | Man page Source code |
| findJuliaNoError | Man page Source code |
| getComplexes | Man page Source code |
| getEdges | Man page Source code |
| getGRN | Man page Source code |
| getGenes | Man page Source code |
| getJuliaEvaluator | Man page Source code |
| getRNAseqMatrix | Man page Source code |
| getReactions | Man page Source code |
| insilicoindividualargs | Man page Source code |
| insilicosystemargs | Man page Source code |
| installJuliaModules | Man page Source code |
| mergeAlleleAbundance | Man page Source code |
| mergeComplexesAbundance | Man page Source code |
| mergePTMAbundance | Man page Source code |
| newJuliaEvaluator | Man page Source code |
| plotBase | Source code |
| plotBaseHM | Source code |
| plotGRN | Man page Source code |
| plotGRNlegend | Source code |
| plotGRNstatic | Man page Source code |
| plotHeatMap | Man page Source code |
| plotLegendComponents | Source code |
| plotMutations | Man page Source code |
| plotSimulation | Man page Source code |
| removeComplex | Man page Source code |
| removeEdge | Man page Source code |
| removeJuliaEvaluator | Man page Source code |
| sampleLibrarySize | Man page Source code |
| simulateInCluster | Source code |
| simulateInSilicoSystem | Man page Source code |
| simulateParallelInSilicoSystem | Man page Source code |
| sortComponents | Man page Source code |
| startJuliaEvCluster | Source code |
| steadyStateAbundance | Man page Source code |
| sumColAbundance | Source code |
| summariseSimulation | Man page Source code |
