View source: R/stochastic_simulation.R
createStochSystem | R Documentation |
Creates a list of molecules, reactions and associated propensities to represent the in silico system.
createStochSystem( insilicosystem, writefile = F, filepath = NULL, filename = "simulation", verbose = T, ev = getJuliaEvaluator() )
insilicosystem |
The in silico system (object of class |
writefile |
Does the julia function write the species and reactions lists in a text file? |
filepath |
If writefile = |
filename |
If writefile = |
verbose |
If TRUE (default), print messages to signal the start and finish of the function. |
ev |
A Julia evaluator (for the XRJulia). If none provided select the current evaluator or create one if no evaluator exists. |
A Julia proxy object to retrieve the stochastic system in the Julia evaluator.
## Not run: mysystem = createInSilicoSystem(G = 5) stochsys = createStochSystem(mysystem) ## End(Not run)
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