View source: R/in_silico_system.R
plotGRNstatic | R Documentation |
Plots the gene regulatory network of the insilico system, including all types of regulation or only those defined by the user.
plotGRNstatic( insilicosystem, edgeType = NULL, showAllVertices = F, plotType = "2D", ... )
insilicosystem |
The in silico system (see |
edgeType |
The type of interactions to plot. If NULL (default value), all the interactions are plotted. Otherwise, can be either:
|
showAllVertices |
Display vertices that don't have any edge? Default is FALSE |
plotType |
The type of plot function to use for the network: can be either
"2D" (default, use the function |
... |
any other arguments to be passed to the plot function, see |
## Not run: mysystem = createInSilicoSystem(G = 10) plotGRNstatic(mysystem) plotGRNstatic(mysystem, edgeType = "TC") plotGRNstatic(mysystem, edgeType = "TC", showAllVertices = T) ## End(Not run)
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