mergeComplexesAbundance: Merge the free and in-complex versions of molecules.

In oliviaAB/sismonr: Simulation of in Silico Multi-Omic Networks

Merge the free and in-complex versions of molecules.

Description

Merge (i.e. sum) the abundance of the free and in-complex versions of each molecule in the results of a simulation.

Usage

mergeComplexesAbundance(df)

Arguments

df	A dataframe with the abundance of the different molecules over time (from simulateInSilicoSystem or simulateParallelInSilicoSystem).

Value

A dataframe in which the abundance of free and in complex versions of a molecule have been merged to give the abundance of the molecule (without distinction of whether or not it is bound in a molecular complex).

Examples

## Not run: 
mysystem = createInSilicoSystem(G = 5, PC.p = 1, PC.TC.p = 1, ploidy = 1)
mysystem = addComplex(mysystem, c(1, 2))
mypop = createInSilicoPopulation(1, mysystem)
sim = simulateInSilicoSystem(mysystem, mypop, 100)
head(sim$Simulation)
mergedComplex = mergeComplexesAbundance(sim$Simulation)
head(mergedComplex)

## End(Not run)

oliviaAB/sismonr documentation built on June 25, 2022, 11:59 p.m.