update.incidence.matrix.full: Update function for incidence matrix
In pbastide/PhylogeneticEM: Automatic Shift Detection using a Phylogenetic EM
View source: R/shifts_manipulations.R
update.incidence.matrix.full R Documentation
Update function for incidence matrix
Description
update.incidence.matrix.full updates the matrix initialized in
init.incidence.matrix.full for the computation of the incidence matrix
in incidence.matrix.full.
Usage
update.incidence.matrix.full(daughtersParams, parent, ...)
Arguments
daughtersParams
: rows of updated matrix corresponding to the
daughters of the current node.
Details
A node belongs to all the lineages of its daughters.
Value
Vector of length ntaxa + Nnode, indicating to which lineages the
branch above the current node belongs to.
pbastide/PhylogeneticEM documentation built on Feb. 12, 2024, 1:27 a.m.
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View source: R/shifts_manipulations.R
| update.incidence.matrix.full | R Documentation |
Update function for incidence matrix
Description
update.incidence.matrix.full updates the matrix initialized in
init.incidence.matrix.full for the computation of the incidence matrix
in incidence.matrix.full.
Usage
update.incidence.matrix.full(daughtersParams, parent, ...)
Arguments
daughtersParams |
: rows of updated matrix corresponding to the daughters of the current node. |
Details
A node belongs to all the lineages of its daughters.
Value
Vector of length ntaxa + Nnode, indicating to which lineages the branch above the current node belongs to.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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