Files in ph-pham/RepSeq

Analysis of High-throughput sequencing repertoire data (RepSeqTools)

R/RcppExports.R R/RepSeq.R R/RepSeqExperiment.R R/basicFunctions.R R/diversityFunctions.R R/plotFunctions.R R/statFunctions.R README.md man/Chaowor.Rd man/RepSeq.Rd man/RepSeqExp.Rd man/RepSeqExperiment-class.Rd man/basicIndices.Rd man/concateRepSeq.Rd man/countFeatures.Rd man/divLevel.Rd man/dropSamples.Rd man/estimateSF.Rd man/filetype.Rd man/filterClonotypes.Rd man/filterCount.Rd man/filterFrequency.Rd man/getOverlaps.Rd man/getPrivates.Rd man/getSingleton.Rd man/iChao.Rd man/muScore.Rd man/muScoreM.Rd man/muScoreOB.Rd man/named.contr.sum.Rd man/normalizeCounts.Rd man/parseAdaptive.Rd man/parseClonotypeR.Rd man/parseMiXCR.Rd man/parseRTCR.Rd man/perturbation.Rd man/plot2v2count.Rd man/plotCountVJ.Rd man/plotDissimilarityMatrix.Rd man/plotDistribVpJ.Rd man/plotFreqVpJ.Rd man/plotFrequencySpectrum.Rd man/plotMDS.Rd man/plotPropVJ.Rd man/plotRenyiProfiles.Rd man/plotSpectratype.Rd man/plotSpectratypeV.Rd man/plotVenn.Rd man/plotmuScore.Rd man/rarefyRepSeqExp.Rd man/raretabRepSeq.Rd man/readClonotypeSet.Rd man/readClonotypes.Rd man/renyiProfiles.Rd man/segmentUsage.Rd man/toDESeq2.Rd