plotmuScore: plot heatmap of counts or percentages

In ph-pham/RepSeq: Analysis of High-throughput sequencing repertoire data (RepSeqTools)

Description

function plots a heatmap of counts or percentages of sorted

Usage

plotmuScore(x, level = c("V", "J", "VJ"), type = c("count", "usage"))

Arguments

x	an object of class RepSeqExperiment
level	of the repertoire
type	count or usage

Value

a heatmap

Examples

## Not run: 
# The package RepSeqData contains example datasets 
library(RepSeqData)
names(sData(RepSeqData))
plot a heatmap of count/usage of repertoire level sorted by the muScore
plotmuScore(x = RepSeqData, level = "V", type = "count")    

## End(Not run)

ph-pham/RepSeq documentation built on Dec. 22, 2021, 7:47 a.m.