anova_pca_metadata: Generate a matrix of anova values for associating principal...
In pinin4fjords/shinyngs: Shiny apps for NGS data
anova_pca_metadata R Documentation
Generate a matrix of anova values for associating principal components with
categorical covariates.
Description
Generate a matrix of anova values for associating principal components with
categorical covariates.
Usage
anova_pca_metadata(pca_coords, pcameta, fraction_explained)
Arguments
pca_coords
Data frame of PCA coordinates, with samples by row and
components by column.
pcameta
Data frame of sample metadata with sample identifiers by row
and variables by column.
fraction_explained
Numeric vector containing the percent contribution
to variance of each component
Value
output A numeric matrix of p values
pinin4fjords/shinyngs documentation built on Jan. 18, 2025, 7:09 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| anova_pca_metadata | R Documentation |
Generate a matrix of anova values for associating principal components with categorical covariates.
Description
Generate a matrix of anova values for associating principal components with categorical covariates.
Usage
anova_pca_metadata(pca_coords, pcameta, fraction_explained)
Arguments
pca_coords |
Data frame of PCA coordinates, with samples by row and components by column. |
pcameta |
Data frame of sample metadata with sample identifiers by row and variables by column. |
fraction_explained |
Numeric vector containing the percent contribution to variance of each component |
Value
output A numeric matrix of p values
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.