compile_contrast_data: Compile contrast stats for inclusion in shinyngs

In pinin4fjords/shinyngs: Shiny apps for NGS data

Compile contrast stats for inclusion in shinyngs

Description

Compile contrast stats for inclusion in shinyngs

Usage

compile_contrast_data(
  differential_stats_files,
  feature_id_column = NULL,
  pval_column = NULL,
  qval_column = NULL,
  fc_column = NULL,
  unlog_foldchanges = FALSE
)

Arguments

differential_stats_files	Tabular files with differential stats
feature_id_column	Feature identifier column in stats files
pval_column	P value column in stats files
qval_column	Q value column in stats files
fc_column	Fold change column in stats files
unlog_foldchanges	Should fold change values be unlogged?

Value

output A named list of data frames by statistic, number of columns equal to input file number

pinin4fjords/shinyngs documentation built on Feb. 28, 2024, 10:19 a.m.