cond_log2_transform_assays: Conditionally apply log2 transformation on assay data based...
In pinin4fjords/shinyngs: Shiny apps for NGS data
cond_log2_transform_assays R Documentation
Conditionally apply log2 transformation on assay data based on log2_assays parameter.
Description
Conditionally apply log2 transformation on assay data based on log2_assays parameter.
Usage
cond_log2_transform_assays(assay_data, log2_assays, threshold = 20)
Arguments
assay_data
A list containing matrices as assay data.
log2_assays
A string parameter that can be NULL, empty, or a non-empty string.
If NULL: log2 transformation will be guessed based on input assays.
If empty: no log2 transformation will be applied.
If non-empty: log2 transformation will be applied unconditionally to specified assays.
threshold
A numeric threshold to determine if an assay should be log-transformed.
Value
A modified assay_data list.
pinin4fjords/shinyngs documentation built on Feb. 28, 2024, 10:19 a.m.
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| cond_log2_transform_assays | R Documentation |
Conditionally apply log2 transformation on assay data based on log2_assays parameter.
Description
Conditionally apply log2 transformation on assay data based on log2_assays parameter.
Usage
cond_log2_transform_assays(assay_data, log2_assays, threshold = 20)
Arguments
assay_data |
A list containing matrices as assay data. |
log2_assays |
A string parameter that can be NULL, empty, or a non-empty string. If NULL: log2 transformation will be guessed based on input assays. If empty: no log2 transformation will be applied. If non-empty: log2 transformation will be applied unconditionally to specified assays. |
threshold |
A numeric threshold to determine if an assay should be log-transformed. |
Value
A modified assay_data list.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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