Description Usage Arguments Value
Convert fragment counts to FPKM values, using the sum as library size. By default, effective length is used, set mean.frag.size to 0 to use total (given) length.
1 | counts2fpkm(counts, lengths, mean.frag.size = 220)
|
counts |
A numeric vector of counts (for one sample). |
lengths |
A numeric vector of same length as 'counts', indicating the length of each transcript. |
mean.frag.size |
A numeric value indicating the mean fragment size (default 220) used for effective length calculation. |
A numeric vector of the corresponding FPKM values.
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