seqc.get.stats: seqc.get.stats
In plger/RNAontheBENCH: RNAontheBENCH - Benchmark of RNAseq quantification and DEA
Description
Usage
Arguments
Value
Description
Returns test statistics for a list of differential expression calls on the SEQC data.
Usage
1
seqc.get.stats(ps, use.fdr = FALSE, pthreshold = 0.01)
Arguments
ps
A list with softwares as names, and lists as elements, as produced by the 'diff.seqc.example' function. Each sublist contains the results of comparisons between A vs B, C vs D, and within each group.
use.fdr
Logical; whether to use adjust the p-values for multiple testing (FDR); default FALSE.
pthreshold
P-value (or FDR if use.fdr=TRUE) threshold to use to compute test statistics.
Value
A data frame.
plger/RNAontheBENCH documentation built on May 25, 2019, 8:22 a.m.
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Description Usage Arguments Value
Description
Returns test statistics for a list of differential expression calls on the SEQC data.
Usage
1 | seqc.get.stats(ps, use.fdr = FALSE, pthreshold = 0.01)
|
Arguments
ps |
A list with softwares as names, and lists as elements, as produced by the 'diff.seqc.example' function. Each sublist contains the results of comparisons between A vs B, C vs D, and within each group. |
use.fdr |
Logical; whether to use adjust the p-values for multiple testing (FDR); default FALSE. |
pthreshold |
P-value (or FDR if use.fdr=TRUE) threshold to use to compute test statistics. |
Value
A data frame.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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