Global functions | |
---|---|
.antilog1m | Man page |
.assign_to_filter | Source code |
.bind_dicts | Source code |
.conn_create | Source code |
.create_row_dict | Source code |
.filter_sce | Source code |
.gen_noise | Source code |
.generate_complex_dict | Source code |
.get_ident | Source code |
.handle_complexes | Source code |
.join_meta | Source code |
.liana_convert | Source code |
.rank_matrix | Man page |
.score_housekeep | Source code |
.score_specs | Source code |
.sp_costrain | Man page |
FormatConnectome | Man page Source code |
FormatNatmi | Man page Source code |
FormatSCA | Man page Source code |
FormatSquidpy | Source code |
FormatiTALK | Man page |
ScoreSpecifics-class | Man page |
account_missing | Source code |
assign_ligrecs | Man page |
assign_lr_weights | Man page Source code |
calculate_gini | Man page |
call_cellchat | Man page Source code |
call_connectome | Man page Source code |
call_italk | Man page Source code |
call_natmi | Man page Source code |
call_sca | Man page Source code |
call_squidpy | Man page Source code |
cellchat_formatDB | Man page Source code |
cellphonedb_score | Man page Source code |
check_if_dissociated | Man page |
chord_freq | Man page |
compile_ligrec | Man page Source code |
compute_mi_dist | Man page Source code |
compute_nst_from_matrix | Man page Source code |
compute_nst_scores | Man page Source code |
compute_pem_scores | Man page Source code |
conn_formatDB | Man page Source code |
connectome_score | Source code |
cytotalk_score | Man page Source code |
decomplexify | Man page |
decompose_tensor | Man page |
filter_nonabundant_celltypes | Man page Source code |
format_c2c_factors | Source code |
generate_homologs | Man page Source code |
generate_lr_geneset | Man page |
generate_orthologs | Man page Source code |
genesymbol_to_uniprot | Man page |
get_abundance_summary | Man page Source code |
get_c2c_factors | Man page Source code |
get_cellcall | Man page |
get_cellchat_missing | Man page |
get_cellphonedb | Source code |
get_connectome | Man page Source code |
get_curated_omni | Man page |
get_cytotalk | Source code |
get_homologene_dict | Man page Source code |
get_logfc | Man page Source code |
get_lr_resources | Man page Source code |
get_natmi | Man page Source code |
get_partners | Man page |
get_permutations | Man page Source code |
get_sca | Man page Source code |
get_up_dict | Man page |
heat_freq | Man page |
join_means | Man page |
liana_aggregate | Man page Source code |
liana_bysample | Man page Source code |
liana_call | Man page Source code |
liana_defaults | Man page Source code |
liana_dotplot | Man page Source code |
liana_heatmap | Man page |
liana_message | Man page Source code |
liana_pipe | Man page Source code |
liana_prep | Man page |
liana_prep.Seurat | Source code |
liana_prep.SingleCellExperiment | Source code |
liana_scores | Man page Source code |
liana_tensor_c2c | Man page Source code |
liana_wrap | Man page Source code |
logfc_score | Source code |
map_custom | Man page |
mean0 | Man page |
mean_permute | Man page |
min0 | Man page |
minmax | Man page Source code |
missing_subunits_to0 | Source code |
natmi_score | Source code |
omni_to_NATMI | Source code |
omnipath_partners | Man page |
pems_from_means | Source code |
plot_abundance_summary | Man page Source code |
plot_c2c_cells | Man page |
plot_c2c_overview | Man page Source code |
plot_context_boxplot | Man page |
plot_context_heat | Man page |
plot_lr_heatmap | Man page |
preprocess_scores | Man page |
rank_aggregate | Man page |
rank_method | Man page |
reassign_params | Source code |
recode.character2 | Man page Source code |
recomplexify | Man page Source code |
sca_formatDB | Man page Source code |
sca_score | Source code |
select_resource | Man page |
show_homologene | Man page Source code |
show_methods | Man page |
show_resources | Man page |
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