ambiguous2regex: Converts ambiguous dna to an appropriate regular expression
In sherrillmix/dnar: Miscellaneous functions to deal with bioinformatic analyses
ambiguous2regex R Documentation
Converts ambiguous dna to an appropriate regular expression
Description
Converts ambiguous dna to an appropriate regular expression
Usage
ambiguous2regex(dna)
Arguments
dna
input sequence with ambiguous bases
Value
regular expression to match the ambiguous dna
References
https://en.wikipedia.org/wiki/Nucleic_acid_notation
Examples
dnaRegex<-ambiguous2regex('ANRT')
grepl(dnaRegex,c('ATGT','ACAT','AGTT'))
sherrillmix/dnar documentation built on July 18, 2022, 10:07 p.m.
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| ambiguous2regex | R Documentation |
Converts ambiguous dna to an appropriate regular expression
Description
Converts ambiguous dna to an appropriate regular expression
Usage
ambiguous2regex(dna)
Arguments
dna |
input sequence with ambiguous bases |
Value
regular expression to match the ambiguous dna
References
https://en.wikipedia.org/wiki/Nucleic_acid_notation
Examples
dnaRegex<-ambiguous2regex('ANRT')
grepl(dnaRegex,c('ATGT','ACAT','AGTT'))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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