sherrillmix/dnar
Miscellaneous functions to deal with bioinformatic analyses

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sherrillmix/dnar: Miscellaneous functions to deal with bioinformatic analyses
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API

API for sherrillmix/dnar
Miscellaneous functions to deal with bioinformatic analyses

Global functions
aa2codons Man page Source code
aa2dna Man page Source code
addSnpsToGenome Man page Source code
adjustWindow Man page Source code
allSameLength Man page Source code
ambiguous2regex Man page Source code
ambiguousBaseCodes Man page
aminoAcids Man page
anyArgsNA Man page Source code
arrow Man page Source code
bases2ambiguous Man page Source code
binary2range Man page Source code
blat2exons Man page Source code
blatFindGaps Man page Source code
blatReadsVsRefs Man page Source code
blockToAlign Man page Source code
cacheOperation Man page Source code
chao Man page Source code
checkBlat Man page Source code
chooseAtLeastOneFromEach Man page Source code
cigarToBlock Man page Source code
cl2pix Source code
cleanMclapply Man page Source code
codons2aa Man page Source code
complementDna Man page Source code
conservativeBoundary Man page Source code
convertLineToUser Man page Source code
convertUserToLine Man page Source code
countNmers Man page Source code
cumpaste Man page Source code
cutBlatReads Man page Source code
cv.glm.par Man page Source code
degap Man page Source code
dna2aa Man page Source code
dna2codons Man page Source code
escapeRegexBracketChars Man page Source code
expandAmbiguous Man page Source code
fillCover Man page Source code
fillDown Man page Source code
fillList Man page Source code
fillZeros Man page Source code
findIntrons Man page Source code
flow2seq Man page Source code
gap2NoGap Man page Source code
gcPercent Man page Source code
generateFasta Man page Source code
gini Man page Source code
highlightDifferences Man page Source code
highlightString Man page Source code
index2range Man page Source code
indexFlow Man page Source code
indexMatrix Man page Source code
insetScale Man page
intsToQual Man page Source code
isError Man page Source code
jensenShannon Man page Source code
killBlat Man page Source code
kullback Man page Source code
lab2rgb Source code
lab2xyz Source code
lagNA Man page Source code
liftCoords Man page Source code
logAxis Man page Source code
mostAbundant Man page Source code
movingStat Man page Source code
multiBlatReadsVsRefs Man page Source code
multiRunBlatNoServer Man page Source code
multiYAxis Man page
noGap2Gap Man page Source code
object.sizes Man page Source code
orderIn Man page Source code
pRare Man page Source code
parseRegion Man page Source code
pasteRegion Man page Source code
pullRegion Man page Source code
pwm Man page Source code
pwmToSeq Man page Source code
qualToInts Man page Source code
rainbow.lab Man page Source code
rao Man page Source code
rareEquation Man page Source code
rarefy Man page Source code
rarefyCounts Man page Source code
read.ace Man page Source code
read.bed Man page Source code
read.blast Man page Source code
read.blat Man page Source code
read.fa Man page Source code
read.fastq Man page Source code
read.phd Man page Source code
read.sam Man page Source code
read.wiggle Man page Source code
readFaDir Man page Source code
readLargeBlat Man page Source code
revComp Man page Source code
reverseAmbiguous Man page
reverseString Man page Source code
runBlat Man page Source code
runBlatNoServer Man page Source code
samFlag Man page Source code
samFlags Man page
samView Man page Source code
scoreFromPWM Man page Source code
seq2flow Man page Source code
seqSplit Man page Source code
shannon Man page Source code
slantAxis Man page Source code
stackRegions Man page Source code
startBlat Man page Source code
stopError Man page Source code
table2vector Man page Source code
toggleCase Man page Source code
trimNs Man page Source code
unifracMatrix Man page Source code
wilsonInt Man page Source code
withAs Man page Source code
write.fa Man page Source code
write.fastq Man page Source code
xyz2rgb Source code
sherrillmix/dnar documentation built on July 18, 2022, 10:07 p.m.

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