qualToInts: Convert fastq chars to integer quals

In sherrillmix/dnar: Miscellaneous functions to deal with bioinformatic analyses

Convert fastq chars to integer quals

Description

Convert fastq chars to integer quals

Usage

qualToInts(quals, baseQual = 33)

Arguments

quals	A vector of strings with one character per quality
baseQual	integer to subtract from quality characters to convert into quality space

Value

list with a vector of integer qualities for each string

Examples

qualToInts(c('!@#$','ABCI+'))

sherrillmix/dnar documentation built on July 18, 2022, 10:07 p.m.