cleanMclapply: A function to break an mclapply into parts, save to disk and...

In sherrillmix/dnar: Miscellaneous functions to deal with bioinformatic analyses

A function to break an mclapply into parts, save to disk and run independently

Description

A function to break an mclapply into parts, save to disk and run independently

Usage

cleanMclapply(
  x,
  applyFunc,
  ...,
  mc.cores = parallel::detectCores(),
  extraCode = "",
  nSplits = mc.cores,
  VOCAL = TRUE,
  envir = .GlobalEnv
)

Arguments

x	vector/list to apply over
applyFunc	function to apply
...	arguments for mclapply
mc.cores	number of cores to use
extraCode	character vector of setup code (each command self-contained within a cell or concatenated with ;)
nSplits	number of splits to make (if > mc.cores then R will restart more frequently and load less data at once)
VOCAL	if TRUE then output status information
envir	environment to look for variables in

Value

the concatenated outputs from applyFunc cleanMclapply(1:10,2,sqrt) cleanMclapply(1:10,2,function(x,y)x^y,y=3)

sherrillmix/dnar documentation built on July 18, 2022, 10:07 p.m.