degap: Remove gap characters from DNA sequences

In sherrillmix/dnar: Miscellaneous functions to deal with bioinformatic analyses

Remove gap characters from DNA sequences

Description

Remove gap characters from DNA sequences

Usage

degap(seq, gaps = c("*", "-", "."))

Arguments

seq	vector of gapped DNA sequences
gaps	vector of characters to be considered gaps

Value

vector of DNA sequences with gaps removed

Examples

degap(c('...ACTATATA----ACATG--G..','ATTAT--T'))
degap(c('1000111011'),'0')

sherrillmix/dnar documentation built on July 18, 2022, 10:07 p.m.