blatFindGaps: Find gaps in blat coordinates
In sherrillmix/dnar: Miscellaneous functions to deal with bioinformatic analyses
blatFindGaps R Documentation
Find gaps in blat coordinates
Description
Find gaps in blat coordinates
Usage
blatFindGaps(qStarts, tStarts, blockSizes)
Arguments
qStarts
comma separated starts for query seq
tStarts
comma separated starts for target seq
blockSizes
comma separated block sizes
Value
data.frame giving qStartAfter, qGaps, tGapStartAfter and tGaps
Examples
blatFindGaps('1,100,200','4,200,300','99,50,100')
sherrillmix/dnar documentation built on July 18, 2022, 10:07 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| blatFindGaps | R Documentation |
Find gaps in blat coordinates
Description
Find gaps in blat coordinates
Usage
blatFindGaps(qStarts, tStarts, blockSizes)
Arguments
qStarts |
comma separated starts for query seq |
tStarts |
comma separated starts for target seq |
blockSizes |
comma separated block sizes |
Value
data.frame giving qStartAfter, qGaps, tGapStartAfter and tGaps
Examples
blatFindGaps('1,100,200','4,200,300','99,50,100')
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.