pwm | R Documentation |
Generate a PWM for a set of sequences
pwm(seqs, chars = c("C", "G", "T", "A"), priors = table(chars) - 1)
seqs |
vector of strings, sequences to form a position weight matrix from (all same length) |
chars |
allowed characters |
priors |
additional counts to add to each column with (default is a lazy way to get a named 0 vector) |
position weight matrix with length(chars) rows and nchar(seqs) columns
pwm(c('ACTG','ACTT','ACTT','ACGT')) pwm(c('ACTG','ACTT','ACTT','ACGT'),priors=c('C'=1,'G'=1,'T'=1,'A'=1))
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.