read.sam: Read a sam file
In sherrillmix/dnar: Miscellaneous functions to deal with bioinformatic analyses
read.sam R Documentation
Read a sam file
Description
Read a sam file
Usage
read.sam(fileName, nrows = -1, skips = -1, condense = TRUE)
Arguments
fileName
name of file
nrows
number of rows to return. -1 for all rows
skips
number of lines to skip (if negative find @ headers automtically)
condense
throw out a bunch of columns for smaller file size?
Value
dataframe with columns qName, flag, tName, pos, cigar, seq
sherrillmix/dnar documentation built on July 18, 2022, 10:07 p.m.
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| read.sam | R Documentation |
Read a sam file
Description
Read a sam file
Usage
read.sam(fileName, nrows = -1, skips = -1, condense = TRUE)
Arguments
fileName |
name of file |
nrows |
number of rows to return. -1 for all rows |
skips |
number of lines to skip (if negative find @ headers automtically) |
condense |
throw out a bunch of columns for smaller file size? |
Value
dataframe with columns qName, flag, tName, pos, cigar, seq
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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