rareEquation | R Documentation |
Calculate rarefaction using formula
rareEquation( counts, samples = unique(round(sum(counts) * seq(0.1, 1, 0.1))), minObs = 1 )
counts |
Counts of species |
samples |
Vector of numbers of draws to calculate rarefaction at |
minObs |
Minimum number of counts to be counted as present e.g. minObs=2 discards singletons |
Vector with predicted rarefied counts for entries and the sampled number of reads for names
rarefy
, link{rarefyCounts}
rareEquation(1:20)
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