startBlat | R Documentation |
Start a blat server
startBlat( nibDir, options = "", gfServer = "gfServer", bit2 = NULL, startPort = 37900, nibSuffix = ".nib", wait = 120 )
nibDir |
directory containing nib files to align against |
options |
options to gfServer |
gfServer |
path to gfServer program |
bit2 |
a bit2 file alternative to nib directory |
startPort |
begin looking for open (no other R called gfServer using) ports on startPort and add 1 until finding one |
nibSuffix |
nib files end in nibSuffix |
wait |
number of 5 second intervals to wait for gfServer to finish starting before giving up |
port of blat server
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