GEO_QC.density: QC.density

In shijianasdf/BasicBioinformaticsAnalysisFromZhongShan: Launch Usual Clinical tool for Kind Yield

Description

QC.density可以观察不同分组（treat vs. control）的芯片表达量密度。基于ggpubr的ggdensity函数。

Usage

QC.density(DesignEset,
           contrast,
           savefile=F,
           names="test1",
           limit.array = 30,
           limit.genes=3000,
           seed=2018)

Author(s)

Weibin Huang

Examples

data(DesignEset)
contrast=list(c("N1.plus","N1"),c("N1.plus","N0"),c("N1","N0")) # a list that contain lots of contrasts.
QC.density(DesignEset,
           contrast,
           savefile=F,
           names="test1",
           limit.array = 30,
           limit.genes=3000,
           seed=2018)

shijianasdf/BasicBioinformaticsAnalysisFromZhongShan documentation built on Jan. 3, 2020, 10:08 p.m.