ceRNAData: Get lnRNA-miRNA/mRNA-miRNA interaction from starBase

In shijianasdf/BasicBioinformaticsAnalysisFromZhongShan: Launch Usual Clinical tool for Kind Yield

Description

Get lnRNA-miRNA/mRNA-miRNA interaction from starBase

Usage

ceRNAData(object, verbose = F)

Arguments

object

a name list(lncRNA/mRNA) of lncRNA and mRNAs.ENSEMBL id or SYMBOL id are all supported

Value

a name list(lncRNA/mRNA) of their interactive miRNAs

Author(s)

Weibin Huang<[e-mail]>

Examples

object <- list(mRNA = c("TP53","TP53","NOTEXIST"),
               lncRNA = c("MALAT1","MALAT1","NOTEXIST"))
ceRNA <- ceRNAData(object)

shijianasdf/BasicBioinformaticsAnalysisFromZhongShan documentation built on Jan. 3, 2020, 10:08 p.m.