API for smitdave/MASH
MASH (Modular Analysis and Simulation for Human Health)

Global functions
AquaEmergeLambdaPlot_utility	Man page
AquaticSite	Man page
EL4P	Man page
EL4P.Landscape.Fit	Man page
EL4P.Mesh.Fit	Man page
EL4P.Parameters	Man page
EggQ	Man page
FeedingSite	Man page
HistoryGeneric	Man page
HistoryTravel	Man page
Human	Man page
HumanEventQ	Man page
HumanPop	Man page
HumanPop.Parameters	Man page
HumanPop_get_PfMOI_PAR	Man page
HumanPop_get_PfMOI_history	Man page
HumanPop_get_PfSI_PAR	Man page
HumanPop_get_PfSI_history	Man page
HumanPop_set_PfMOI_PAR	Man page
HumanPop_set_PfSI_PAR	Man page
HumanPop_set_humanPfMOI	Man page
HumanPop_set_humanPfSI	Man page
Human_get_PfMOI_PAR	Man page
Human_get_PfSI_PAR	Man page
Human_set_humanPfMOI	Man page
Human_set_humanPfSI	Man page
ImagoQ	Man page
K2psi_MicroEL4P	Man page
Landscape	Man page
Landscape.Aqua.Parameters	Man page
Landscape.Feeding.Parameters	Man page
Landscape.Parameters	Man page
MACRO.Humans.Setup	Man page
MACRO.MosquitoPop.Parameters	Man page
MACRO.Patch.Emerge.Setup	Man page
MACRO.Patch.Parameters	Man page
MACRO.Tile.Parameters	Man page
MASH	Man page
MASH-package	Man page
MBITES.BRO.Cohort.Setup	Man page
MBITES.BRO.Parameters	Man page
MBITES.BRO.Setup	Man page
MBITES.Cohort.Setup	Man page
MBITES.FULL.Parameters	Man page
MBITES.Generic.Setup	Man page
MICRO.EL4P.Setup	Man page
MICRO.Emerge.Setup	Man page
MICRO.Humans.Setup	Man page
MacroHumanPop_get_patchID	Man page
MacroHumanPop_set_patchID	Man page
MacroHuman_add2Q_Bites	Man page
MacroHuman_add2Q_returnHome	Man page
MacroHuman_add2Q_takeTrip	Man page
MacroHuman_event_returnHome	Man page
MacroHuman_event_takeTrip	Man page
MacroHuman_expectedBites	Man page
MacroHuman_get_MosquitoPointer	Man page
MacroHuman_get_PatchesPointer	Man page
MacroHuman_get_TilePointer	Man page
MacroHuman_get_location	Man page
MacroHuman_get_myEIR	Man page
MacroHuman_get_patchID	Man page
MacroHuman_get_travel	Man page
MacroHuman_get_travelHistoryHuman	Man page
MacroHuman_get_travelHistoryHumanPop	Man page
MacroHuman_go_Patch	Man page
MacroHuman_init_travel	Man page
MacroHuman_json_travelHistory	Man page
MacroHuman_queueInfectiousBites	Man page
MacroHuman_returnHome	Man page
MacroHuman_set_MosquitoPointer	Man page
MacroHuman_set_PatchesPointer	Man page
MacroHuman_set_TilePointer	Man page
MacroHuman_set_location	Man page
MacroHuman_set_myEIR	Man page
MacroHuman_set_patchID	Man page
MacroHuman_set_travel	Man page
MacroHuman_sumKappa_PfMOI	Man page
MacroHuman_sumKappa_PfSI	Man page
MacroHuman_takeTrip	Man page
MacroHuman_updateKappa	Man page
MacroMosquitoPop	Man page
MacroPatch	Man page
MacroTile	Man page
MicroKernelPlot_utility	Man page
MicroKernel_DistanceMat	Man page
MicroKernel_PowerKernel	Man page
MicroKernel_SampleMvOb_MicroMosquitoPopFemale	Man page
MicroKernel_exactAll	Man page
MicroKernel_exactMvOb	Man page
MicroKernel_moveMe_BRO	Man page
MicroKernel_moveMe_BROM	Man page
MicroKernel_moveMe_FULL	Man page
MicroKernel_moveMe_Male	Man page
MicroKernel_prSort	Man page
MicroLandscapePlot_utility	Man page
MicroMosquitoFemale	Man page
MicroMosquitoMale	Man page
MicroMosquitoPop.Setup	Man page
MicroMosquitoPopFemale_clear_pop	Man page
MicroMosquitoPopFemale_extend_pop	Man page
MicroMosquitoPopFemale_push_pop	Man page
MicroMosquitoPopFemale_update_nullPop	Man page
MicroMosquitoPopFemale_update_pop	Man page
MicroMosquitoPopFemale_which_alive	Man page
MicroTile	Man page
MosquitoFemaleHistory	Man page
PfMOI.Parameters	Man page
PfMOI.Setup	Man page
PfMOI_increment_PfID	Man page
PfMOI_ttClearPf_Independent	Man page
PfMOI_ttClearPf_Interaction	Man page
PfMOI_ttFeverPf	Man page
PfMOI_ttGSWanePf	Man page
PfMOI_ttInfectionPf	Man page
PfMOI_ttPEWanePf	Man page
PfMOI_ttSusceptiblePf	Man page
PfMOI_ttTreatPf	Man page
PfSI.Parameters	Man page
PfSI.Setup	Man page
PfSI_increment_PfID	Man page
PfSI_ttClearPf	Man page
PfSI_ttFeverPf	Man page
PfSI_ttGSWanePf	Man page
PfSI_ttInfectionPf	Man page
PfSI_ttPEWanePf	Man page
PfSI_ttSusceptiblePf	Man page
PfSI_ttTreatPf	Man page
RiskQ	Man page
SEARCH.MicroKernel.Setup	Man page
SimBitePfMOI	Man page
SimBitePfMOI.Setup	Man page
SimBitePfSI.Setup	Man page
SimBite_MeanBites	Man page
SimBite_WaitingTime	Man page
add2Q_SimBitePfMOI	Man page
add2Q_endPfMOI	Man page
add2Q_endPfSI	Man page
add2Q_endprophylaxisPfMOI	Man page
add2Q_endprophylaxisPfSI	Man page
add2Q_feverPfMOI	Man page
add2Q_feverPfSI	Man page
add2Q_gsvaccinatePfMOI	Man page
add2Q_gsvaccinatePfSI	Man page
add2Q_gswanePfMOI	Man page
add2Q_gswanePfSI	Man page
add2Q_infectHumanPfMOI	Man page
add2Q_infectHumanPfSI	Man page
add2Q_pevaccinatePfMOI	Man page
add2Q_pevaccinatePfSI	Man page
add2Q_pewanePfMOI	Man page
add2Q_pewanePfSI	Man page
add2Q_treatPfMOI	Man page
add2Q_treatPfSI	Man page
addCohort_MacroEmerge	Man page
addCohort_MicroEL4P	Man page
addCohort_MicroEL4PSite	Man page
addCohort_MicroEmerge	Man page
addCohort_MicroEmergeSite	Man page
allocEggQ	Man page
allocImagoQ	Man page
betaRootA	Man page
betaRootB	Man page
calcLambda_MicroEL4P	Man page
calculateBionomics_utility	Man page
colLuminosity_utility	Man page
emergingAdults_MacroEmerge	Man page
endPfMOI	Man page
endPfSI	Man page
endprophylaxisPfMOI	Man page
endprophylaxisPfSI	Man page
event_SimBitePfMOI	Man page
event_endPfMOI	Man page
event_endPfSI	Man page
event_endprophylaxisPfMOI	Man page
event_endprophylaxisPfSI	Man page
event_feverPfMOI	Man page
event_feverPfSI	Man page
event_gsvaccinatePfMOI	Man page
event_gsvaccinatePfSI	Man page
event_gswanePfMOI	Man page
event_gswanePfSI	Man page
event_infectHumanPfMOI	Man page
event_infectHumanPfSI	Man page
event_pevaccinatePfMOI	Man page
event_pevaccinatePfSI	Man page
event_pewanePfMOI	Man page
event_pewanePfSI	Man page
event_treatPfMOI	Man page
event_treatPfSI	Man page
extend_PatchesImagoQ	Man page
feeding_PfMOI	Man page
feeding_PfSI	Man page
feverPfMOI	Man page
feverPfSI	Man page
gammaRates	Man page
getEIP_MacroMosquitoPop	Man page
get_MicroHumanPop_FemalePopPointer	Man page
get_MicroHumanPop_LandscapePointer	Man page
get_MicroHumanPop_TilePointer	Man page
get_MicroHuman_ActivitySpace	Man page
get_MicroHuman_FemalePopPointer	Man page
get_MicroHuman_LandscapePointer	Man page
get_MicroHuman_TilePointer	Man page
get_MicroKernel_movement_BRO	Man page
get_MicroKernel_movement_BROM	Man page
get_MicroKernel_movement_FULL	Man page
get_MicroKernel_movement_Male	Man page
get_PatchesEggQ	Man page
get_PatchesImagoQ	Man page
get_lambda_MicroEmerge	Man page
get_season	Man page
ggColOffset_utility	Man page
ggCol_utility	Man page
gsvaccinatePfMOI	Man page
gsvaccinatePfSI	Man page
gswanePfMOI	Man page
gswanePfSI	Man page
humanPfMOI	Man page
humanPfSI	Man page
importMicroMosquitoHistory_utility	Man page
infectHumanPfMOI	Man page
infectHumanPfSI	Man page
infectiousBite_PfMOI	Man page
infectiousBite_PfSI	Man page
init_MACRO_PfMOI	Man page
init_MACRO_PfSI	Man page
init_MICRO_PfMOI	Man page
init_MICRO_PfSI	Man page
init_MacroTile_PfMOI	Man page
init_MacroTile_PfSI	Man page
init_MicroHumanPop_ActivitySpace	Man page
init_MicroHuman_ActivitySpace	Man page
init_Pathogens_MicroMosquitoFemale_PfMOI	Man page
init_Pathogens_MicroMosquitoFemale_PfSI	Man page
init_Pathogens_MicroMosquitoPopFemale_PfMOI	Man page
init_Pathogens_MicroMosquitoPopFemale_PfSI	Man page
layEggs_MacroMosquitoPop	Man page
lmTest_PfMOI	Man page
lmTest_PfSI	Man page
makeLambda_Macro	Man page
makeLambda_MicroEmerge	Man page
manage_PatchesImagoQ	Man page
mbitesBRO_BloodMeal	Man page
mbitesBRO_Pop_MBITES	Man page
mbitesBRO_boutB	Man page
mbitesBRO_boutO	Man page
mbitesBRO_boutR	Man page
mbitesBRO_cohort_humanEncounter	Man page
mbitesBRO_cohort_oneMosquito_MBITES	Man page
mbitesBRO_cohort_simCohort	Man page
mbitesBRO_enterHouse	Man page
mbitesBRO_get_MySiteType	Man page
mbitesBRO_get_WTS	Man page
mbitesBRO_get_restHaz	Man page
mbitesBRO_get_surviveFlightProb	Man page
mbitesBRO_humanEncounter	Man page
mbitesBRO_landingSpot	Man page
mbitesBRO_layEggs_EL4P	Man page
mbitesBRO_layEggs_Emerge	Man page
mbitesBRO_newSpot	Man page
mbitesBRO_oneBout	Man page
mbitesBRO_oneMosquito_MBITES	Man page
mbitesBRO_timingExponential	Man page
mbitesBRO_zooEncounter	Man page
mbitesCohort_chooseHost	Man page
mbitesGeneric_chooseHost	Man page
mbitesGeneric_isActive	Man page
mbitesGeneric_isAlive	Man page
mbitesGeneric_pEnergySurvival	Man page
mbitesGeneric_pOverFeed	Man page
mbitesGeneric_pReFeed	Man page
mbitesGeneric_pSenesce	Man page
mbitesGeneric_pSugarBout	Man page
mbitesGeneric_pTatter	Man page
mbitesGeneric_rBatchSizeBms	Man page
mbitesGeneric_rBatchSizeNorm	Man page
mbitesGeneric_rBloodMealSize	Man page
mbitesGeneric_rEggMaturationTimeNorm	Man page
mbitesGeneric_rEggMaturationTimeOff	Man page
mbitesGeneric_rTatterSize	Man page
mbitesGeneric_surviveFlight	Man page
mbitesGeneric_surviveResting	Man page
meshK_MicroEL4P	Man page
mosquitoPfMOI	Man page
mosquitoPfSI	Man page
newEgg	Man page
newImago	Man page
oneDay_MacroEmerge	Man page
oneDay_RM	Man page
oneStep_MicroEL4P	Man page
oneStep_MicroEL4PSite	Man page
oneStep_MicroEmerge	Man page
oneStep_MicroEmergeSite	Man page
ovipositionEq_oneHistory_utility	Man page
ovipositionEq_utility	Man page
pevaccinatePfMOI	Man page
pevaccinatePfSI	Man page
pewanePfMOI	Man page
pewanePfSI	Man page
plot_PfSI	Man page
plot_PfSIOneTrajectory	Man page
pointsClustered	Man page
pointsLattice	Man page
pointsOverdispersed	Man page
pointsPoisson	Man page
probeHost_PfMOI	Man page
probeHost_PfSI	Man page
probeHost_SimBitePfMOI	Man page Man page
probing_PfMOI	Man page
probing_PfSI	Man page
psi2K_cf_MicroEL4P	Man page
psi2K_plot_MicroEL4P	Man page
psiFit_MicroEL4P	Man page
queueBitesNegBinom_SimBitePfSI	Man page
queueBites_SimBitePfMOI	Man page
queueVaccination_SimBitePfMOI	Man page
rdtTest_PfMOI	Man page
rdtTest_PfSI	Man page
run2eq_MicroEL4P	Man page
sampleIx_utility	Man page
set_FemalePop_MicroTile	Man page
set_MicroHumanPop_FemalePopPointer	Man page
set_MicroHumanPop_LandscapePointer	Man page
set_MicroHumanPop_TilePointer	Man page
set_MicroHuman_ActivitySpace	Man page
set_MicroHuman_FemalePopPointer	Man page
set_MicroHuman_LandscapePointer	Man page
set_MicroHuman_TilePointer	Man page
set_PatchesEggQ	Man page
set_PatchesImagoQ	Man page
set_lambda_MicroEmerge	Man page
set_season	Man page
simMICRO_oneStep	Man page
simMacro	Man page
sim_MicroHumanPop_ActivitySpace	Man page
sim_MicroHuman_ActivitySpace	Man page
siteAges	Man page
sitePops	Man page
treatPfMOI	Man page
treatPfSI	Man page
updateLandscape_MicroEL4P	Man page
util_List2Df	Man page
util_PfSIHistory	Man page
util_PfSISlice	Man page
util_PfSIoneHistory	Man page