orderAccessions: Order Accessions

In ss-lab-cancerunit/SpiderSeqR: A Tool for Integration of Big Bio Data

Description

orderAccessions orders character vectors or lists according to numbers, disregarding any lettrs.

Usage

orderAccessions(x, na.last = TRUE)

Arguments

x	Character vector (or list containing character vectors) to be ordered
na.last	For controlling the treatment of NAs (see order)

Value

Integer vector with order of indices

See Also

order

Examples

startSpiderSeqRDemo()
df <- searchForAccession("SRP026280") 
order_columns <- list(df$study_accession, df$sample_accession, 
    df$experiment_accession, df$run_accession, df$gsm)
df <- df[orderAccessions(order_columns), ]

ss-lab-cancerunit/SpiderSeqR documentation built on Nov. 2, 2020, 12:18 a.m.