compareFits.ZScores.Biomass: Compare z-scores from fitting biomass time series by fleet...

In wStockhausen/rCompTCMs: Package to compare TCSAM02, rsimTCSAM, and TCSAM2013 model runs

Compare z-scores from fitting biomass time series by fleet among several model runs

Description

Function to compare z-scores from fitting biomass time series by fleet among several model runs.

Usage

compareFits.ZScores.Biomass(
  objs = NULL,
  fleets = "all",
  fleet.type = c("survey", "fishery"),
  catch.type = c("index", "retained", "discard", "total"),
  plotPoints = TRUE,
  colour_scale = NULL,
  fill_scale = NULL,
  pdf = NULL,
  showPlot = FALSE,
  verbose = FALSE
)

Arguments

objs	object that can be converted into a list of tcsam2013.resLst and/or tcsam02.resLst objects
fleets	names of fleets to include (or "all")
fleet.type	fleet type ('fishery' or 'survey')
catch.type	catch type ('index','retained', 'discard', or 'total')
plotPoints	flag to plot points
colour_scale	ggplot2 colour scale to substitute for default (if not NULL)
fill_scale	ggplot2 fill scale to substitute for default (if not NULL)
pdf	name for output pdf file
showPlot	flag (T/F) to show plot
verbose	flag (T/F) to print diagnostic information

Details

Uses rTCSAM2013::getMDFR.SurveyQuantities(), rTCSAM2013::getMDFR.FisheryQuantities(), rTCSAM02::getMDFR.ZScores.Biomass(). Also uses wtsUtilities::printGGList.

Value

non-nested list of ggplot2 objects, with captions as names

wStockhausen/rCompTCMs documentation built on Aug. 27, 2024, 7:15 p.m.