createCommPath: To create a CommPath object

In yingyonghui/CommPath:

To create a CommPath object

Description

To create a CommPath object

Usage

createCommPath(expr.mat, cell.info, species)

Arguments

expr.mat	Matrix or data frame of expression matrix, with genes in rows and cells in columns
cell.info	Vector of lables indicating identity classes of cells in the expression matrix, and the order of lables should match the order of cells in the expression matrix; or a data frame containing the meta infomation of cells with the row names matching the cells in the expression matrix and a column named as "Cluster" must be included to indicate identity classes of cells
species	Species, either 'hsapiens'('human'), 'mmusculus'('mouse'), or 'rnorvegicus'('rat')

Value

CommPath object

yingyonghui/CommPath documentation built on June 15, 2025, 6:29 a.m.