findLRpairs: To find marker ligands and marker receptors
In yingyonghui/CommPath:
View source: R/CommPath-main.R
findLRpairs R Documentation
To find marker ligands and marker receptors
Description
To find marker ligands and marker receptors
Usage
findLRpairs(object, logFC.thre = 0, p.thre = 0.05)
Arguments
object
CommPath object
logFC.thre
logFC threshold, marker genes with a logFC > logFC.thre will be considered
p.thre
p threshold, marker genes with a adjust p value < p.thre will be considered
Value
List containing the ligand-receptor interaction information
yingyonghui/CommPath documentation built on June 15, 2025, 6:29 a.m.
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View source: R/CommPath-main.R
| findLRpairs | R Documentation |
To find marker ligands and marker receptors
Description
To find marker ligands and marker receptors
Usage
findLRpairs(object, logFC.thre = 0, p.thre = 0.05)
Arguments
object |
CommPath object |
logFC.thre |
logFC threshold, marker genes with a logFC > logFC.thre will be considered |
p.thre |
p threshold, marker genes with a adjust p value < p.thre will be considered |
Value
List containing the ligand-receptor interaction information
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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