rescale: Rescale phylogenetic objects of different types

In phytools: Phylogenetic Tools for Comparative Biology (and Other Things)

Rescale phylogenetic objects of different types

Description

Generic method for rescaling different types of phylogenetic trees.

Usage

rescale(x, ...)

Arguments

x	phylogenetic tree object to be rescaled: e.g., object of class "phylo" or "simmap".
...	other arguments to be used in rescaling, depending on the object class. (E.g., see rescale.phylo in geiger and rescale.simmap.)

Details

See rescale.phylo in geiger and rescale.simmap for details.

Value

A rescaled phylogenetic tree object.

Author(s)

Liam Revell [e-mail]

References

Pennell, M.W., J. M. Eastman, G. J. Slater, J. W. Brown, J. C. Uyeda, R. G. FitzJohn, M. E. Alfaro, and L. J. Harmon (2014) geiger v2.0: an expanded suite of methods for fitting macroevolutionary models to phylogenetic trees. Bioinformatics, 30, 2216-2218.

Revell, L. J. (2024) phytools 2.0: an updated R ecosystem for phylogenetic comparative methods (and other things). PeerJ, 12, e16505.

See Also

rescale.phylo, rescale.simmap

phytools documentation built on April 3, 2025, 10:43 p.m.