checkPicardJar: checkPicardJar
In HTSeqGenie: A NGS analysis pipeline.
Description
Usage
Arguments
Details
Value
Author(s)
Description
Check for a jar file from picard tools
Usage
1
checkPicardJar(toolname, path = getOption("picard.path"))
Arguments
toolname
Name of the Picard Tool, e.g. MarkDuplicates
path
Path to folder containing picard jars
Details
Call a tool from picard and see if it responds.
Value
TRUE if tool can be called, FALSE otherwise
Author(s)
Jens Reeder
HTSeqGenie documentation built on Nov. 8, 2020, 6:12 p.m.
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Description Usage Arguments Details Value Author(s)
Description
Check for a jar file from picard tools
Usage
1 | checkPicardJar(toolname, path = getOption("picard.path"))
|
Arguments
toolname |
Name of the Picard Tool, e.g. MarkDuplicates |
path |
Path to folder containing picard jars |
Details
Call a tool from picard and see if it responds.
Value
TRUE if tool can be called, FALSE otherwise
Author(s)
Jens Reeder
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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