detectQualityInFASTQFile: Detect quality protocol from a FASTQ file
In HTSeqGenie: A NGS analysis pipeline.
Description
Usage
Arguments
Value
Author(s)
Description
Detect quality protocol from a FASTQ file
Usage
1
detectQualityInFASTQFile(filename, nreads = 5000)
Arguments
filename
Path to a FASTQ or gzipped-FASTQ file
nreads
Number of reads to test quality on. Default is 5000.
Value
A character vector containing the compatible qualities. NULL if none.
Author(s)
Jens Reeder
HTSeqGenie documentation built on Nov. 8, 2020, 6:12 p.m.
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Description Usage Arguments Value Author(s)
Description
Detect quality protocol from a FASTQ file
Usage
1 | detectQualityInFASTQFile(filename, nreads = 5000)
|
Arguments
filename |
Path to a FASTQ or gzipped-FASTQ file |
nreads |
Number of reads to test quality on. Default is 5000. |
Value
A character vector containing the compatible qualities. NULL if none.
Author(s)
Jens Reeder
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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