Files in IdMappingAnalysis

ID Mapping Analysis

inst/doc/IdMappingAnalysis.pdf inst/doc/IdMappingAnalysis.R vignettes/ECM_algorithm_for_two_clusters.pdf demo/readECMdoc.R demo/DataAnalysis.R demo/InteractiveDataAnalysis.R R/subset.R R/misc.R R/jointUniquePairs.extensions.R R/jointIdMap.R R/idMapDiffCounts.R R/data.R R/zzz.R R/mixture.R R/jointUniquePairs.plots.R R/idMapBase.R R/bootstrap.R R/dataFilter.R R/jointUniquePairs.R R/corr.R R/IdMappingAnalysis-package.R R/jointUniquePairs.interactive.plots.R R/display.R R/fit2clusters.R R/jointIdMap.plots.R R/corrData.R R/uniquePairs.R R/idMapCounts.R R/idMap.R R/idMapDiff.R R/expectedUtility.R man/plot.Corr.Rd man/do.glm.JointUniquePairs.Rd man/minCountConstraint.DataFilter.Rd man/primaryIDs.IdMapBase.Rd man/IdMap.Rd man/mixture.boxplot.JointUniquePairs.Rd man/getUniquePairs.Corr.Rd man/secondaryKey.Mixture.Rd man/interactive.mixture.boxplot.JointUniquePairs.Rd man/summary.IdMapDiffCounts.Rd man/byColNames.Subset.Rd man/secondaryKey.CorrData.Rd man/clust.Mixture.Rd man/getMapNames.JointUniquePairs.Rd man/interleave.Misc.Rd man/logTen.DataFilter.Rd man/getCompoundGroups.IdMapDiffCounts.Rd man/getCorrDataFrame.JointUniquePairs.Rd man/Mixture.Rd man/getExperimentSet.CorrData.Rd man/swapKeys.UniquePairs.Rd man/as.data.frame.IdMapBase.Rd man/DataFilter.Rd man/byColumn.Subset.Rd man/IdMapBase.Rd man/boxplotdataJitter.JointUniquePairs.Rd man/corr.boxplot.JointUniquePairs.Rd man/plot.Bootstrap.Rd man/examples.Rd man/getMatchInfo.JointUniquePairs.Rd man/as.data.frame.JointIdMap.Rd man/subsetCorr.JointUniquePairs.Rd man/fisherTransformInverse.DataFilter.Rd man/Bootstrap.Rd man/getSampleNames.CorrData.Rd man/getCounts.IdMap.Rd man/JointIdMap.Rd man/diffCounts.plot.JointIdMap.Rd man/getData.Corr.Rd man/removeNASeries.DataFilter.Rd man/minAvgCountConstraint.DataFilter.Rd man/IdMapDiffCounts.Rd man/create.UniquePairs.Rd man/aligned.IdMapBase.Rd man/textBoundingBox.Display.Rd man/Display.Rd man/CsvList.merge.Misc.Rd man/IdMapDiff.Rd man/minCountGroupConstraint.DataFilter.Rd man/primaryKey.CorrData.Rd man/dimnames.IdMapBase.Rd man/pack.experiments.CorrData.Rd man/subsetData.JointUniquePairs.Rd man/expectedUtility.Rd man/JointUniquePairs.Rd man/getUniquePairs.JointUniquePairs.Rd man/CorrData.Rd man/interactive.mixture.plot.JointUniquePairs.Rd man/getBootstrap.JointUniquePairs.Rd man/secondaryKey.IdMapBase.Rd man/plot.CorrData.Rd man/as.IdMap.UniquePairs.Rd man/interactive.plot.CorrData.Rd man/progressMsg.Display.Rd man/getStats.IdMapCounts.Rd man/do.apply.DataFilter.Rd man/create.Display.Rd man/UniquePairs.Rd man/to.binary.logical.Misc.Rd man/fit2clusters.Rd man/getMapNames.JointIdMap.Rd man/getMixture.JointUniquePairs.Rd man/as.MultiSet.CorrData.Rd man/equals.UniquePairs.Rd man/getStats.Mixture.Rd man/words.Misc.Rd man/ecdf.plot.JointIdMap.Rd man/getMatch.UniquePairs.Rd man/primaryKey.IdMapBase.Rd man/getName.IdMapBase.Rd man/line.loess.Display.Rd man/primaryKey.Mixture.Rd man/getMatchInfo.JointIdMap.Rd man/getUnionIdMap.JointIdMap.Rd man/interactive.corr.plot.JointUniquePairs.Rd man/line.unsorted.Display.Rd man/getCorrData.JointUniquePairs.Rd man/getIdMapList.JointIdMap.Rd man/to.base.Misc.Rd man/getCorr.JointUniquePairs.Rd man/interactive.plot.JointUniquePairs.Rd man/getUniquePairs.CorrData.Rd man/byRow.Subset.Rd man/Corr.Rd man/as.UniquePairs.IdMap.Rd man/as.list.IdMap.Rd man/swapKeys.IdMap.Rd man/fisherTransformJacobean.DataFilter.Rd man/Misc.Rd man/mixture.plot.JointUniquePairs.Rd man/plot.Mixture.Rd man/getCompoundEvents.IdMapDiffCounts.Rd man/merge.IdMap.Rd man/fisherTransform.DataFilter.Rd man/Subset.Rd man/getData.Mixture.Rd man/unique.UniquePairs.Rd man/copy.Display.Rd man/to.index.expr.Misc.Rd man/dim.IdMapBase.Rd man/Generic.Roo.Rd man/getCounts.JointIdMap.Rd man/boxplot.JointUniquePairs.Rd man/byRowNames.Subset.Rd man/subsetGroups.JointUniquePairs.Rd man/plot.IdMapDiffCounts.Rd man/IdMapCounts.Rd man/000-LB-.IdMapBase.Rd man/getDiff.JointIdMap.Rd man/interactive.corr.boxplot.JointUniquePairs.Rd man/plot.IdMapCounts.Rd man/zoom.pars.Display.Rd man/corr.plot.JointUniquePairs.Rd