PWMEmpiricalBackground-class: Background for calculating empirical P-values
In PWMEnrich: PWM enrichment analysis
Description
This object contains raw scores for one very long sequence, thus it can be very large.
Slots
bg.source:textual description of where the background distribution is derived from
bg.fwd:affinity scores (odds) for the forward strand. PWMs as columns
bg.rev:affinity scores (odds) for the reverse strand. PWMs as columns
pwms:the pwms for which the background has been compiled
PWMEnrich documentation built on Nov. 8, 2020, 7:45 p.m.
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Description
This object contains raw scores for one very long sequence, thus it can be very large.
Slots
bg.source:textual description of where the background distribution is derived from
bg.fwd:affinity scores (odds) for the forward strand. PWMs as columns
bg.rev:affinity scores (odds) for the reverse strand. PWMs as columns
pwms:the pwms for which the background has been compiled
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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