Nothing
Alignment, quantification and analysis of RNA sequencing data (including both bulk RNA-seq and scRNA-seq) and DNA sequenicng data (including ATAC-seq, ChIP-seq, WGS, WES etc). Includes functionality for read mapping, read counting, SNP calling, structural variant detection and gene fusion discovery. Can be applied to all major sequencing techologies and to both short and long sequence reads.
Package details |
|
---|---|
Author | Wei Shi, Yang Liao and Gordon K Smyth with contributions from Jenny Dai |
Bioconductor views | Alignment ChIPSeq GeneExpression GeneFusionDetection GeneRegulation GeneticVariability Genetics GenomeAnnotation ImmunoOncology IndelDetection MultipleSequenceAlignment Preprocessing QualityControl RNASeq SNP SequenceMatching Sequencing SingleCell VariantAnnotation VariantDetection |
Maintainer | Wei Shi <wei.shi@onjcri.org.au>, Yang Liao <yang.liao@onjcri.org.au> and Gordon K Smyth <smyth@wehi.edu.au> |
License | GPL (>=3) |
Version | 2.4.3 |
URL | http://bioconductor.org/packages/Rsubread |
Package repository | View on Bioconductor |
Installation |
Install the latest version of this package by entering the following in R:
|
Any scripts or data that you put into this service are public.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.