Function converts predicted binding sites into a GRanges object (package: GenomicFeatures). This allows for easy interaction with other tools as well as output of different formats (bed, gff).
An object of the class "cobindr", which will hold the predicted binding site locations.
optional additional parameters
A GRanges object holding the positions of all predicted transcription factor binding sites relative to the input sequence.
Robert Lehmann <email@example.com>
get.pairs write.bindingsites write.bindingsites.table
# export(get.bindingsite.ranges(runObj), "tfbs_hits.gff3")
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