setfCI: the generic function 'setfCI' for s4 class

In fCI: f-divergence Cutoff Index for Differential Expression Analysis in Transcriptomics and Proteomics

Description

the generic function 'setfCI' for s4 class

Usage

setfCI(.Object, wt.index, df.index, fold.cutoff.list, 
  center.distribution)

Arguments

.Object	the fCI object
wt.index	the control sample column ids, such as c(1,2)
df.index	the case sample column ids, such as c(1,2)
fold.cutoff.list	the predefined fold change cut-off such as list(seq(from=1.1, to=3.0, by=0.1))
center.distribution	a boolean value showing that if the users want to center the distribution or not

Details

TBD

Value

NA	No values will be returned

Note

TBD

Author(s)

Shaojun Tang

References

http://software.steenlab.org/fCI/

See Also

TBD

Examples

 fci=new("NPCI")
 fci=setfCI(fci, 7:8, 11:12, seq(from=1.1,to=3,by=0.1), TRUE)

fCI documentation built on Nov. 8, 2020, 6:53 p.m.