get.npci.data: return a fCI object given the gene expression data
In fCI: f-divergence Cutoff Index for Differential Expression Analysis in Transcriptomics and Proteomics
Description
Usage
Arguments
Details
Value
Note
Author(s)
References
See Also
Examples
View source: R/precomputefCI.R
Description
return a fCI object given the gene expression data
Usage
1
get.npci.data(sample.data.normalized, wt.index, df.index)
Arguments
sample.data.normalized
wt.index
df.index
Details
TBD
Value
expression ratio
a dataframe of fCI gene expression ratios (folds)
defined by control-control index and control-case index
Note
TBD
Author(s)
Shaojun Tang
References
http://software.steenlab.org/fCI/
See Also
TBD
Examples
1
2
3
4
5
sample.data.normalized=data.frame(matrix(sample(3:100, 100*4, replace=TRUE),
100,4))
wt.index=c(1,2)
df.index=c(1,3)
get.npci.data(sample.data.normalized, wt.index, df.index)
fCI documentation built on Nov. 8, 2020, 6:53 p.m.
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Description Usage Arguments Details Value Note Author(s) References See Also Examples
View source: R/precomputefCI.R
Description
return a fCI object given the gene expression data
Usage
1 | get.npci.data(sample.data.normalized, wt.index, df.index)
|
Arguments
sample.data.normalized |
|
wt.index |
|
df.index |
Details
TBD
Value
expression ratio |
a dataframe of fCI gene expression ratios (folds) defined by control-control index and control-case index |
Note
TBD
Author(s)
Shaojun Tang
References
http://software.steenlab.org/fCI/
See Also
TBD
Examples
1 2 3 4 5 | sample.data.normalized=data.frame(matrix(sample(3:100, 100*4, replace=TRUE),
100,4))
wt.index=c(1,2)
df.index=c(1,3)
get.npci.data(sample.data.normalized, wt.index, df.index)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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