Example data as a LumiBatch object which is a subset of Barnes data (Barnes, 2005)
A 'LumiBatch' object
The data is from (Barnes, 2005). It used Sentrix HumanRef-8 Expression BeadChip. Two samples "100US" and "95US:5P" (each has two technique replicates) were selected. In order to save space, 8000 genes were randomly selected. As a result, the example data includes 8000 genes, each has 4 measurements. The full data set was included in the Bioconductor Experiment data package lumiBarnes.
The entire data set has been built as a lumiBarnes data object and can be downloaded from Bioconductor Experiment Data.
Barnes, M., Freudenberg, J., Thompson, S., Aronow, B. and Pavlidis, P. (2005) Ex-perimental comparison and cross-validation of the Affymetrix and Illumina gene expression analysis platforms, Nucleic Acids Res, 33, 5914-5923.
The detailed data information can be found at: http://www.bioinformatics.ubc.ca/pavlidis/lab/platformCompare/
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