is.nuID: nuID self-identification

In lumi: BeadArray Specific Methods for Illumina Methylation and Expression Microarrays

Description

Self-identify nuID (nucleotide universal identifier) by verify the check code value and the checksum value

Usage

is.nuID(id)

Arguments

id	nuId or other string

Value

Return TRUE if id is a nuID, or else return FALSE.

Author(s)

Pan Du

References

Du, P., Kibbe, W.A. and Lin, S.M., "nuID: A universal naming schema of oligonucleotides for Illumina, Affymetrix, and other microarrays", Biology Direct 2007, 2:16 (31May2007).

See Also

seq2id, id2seq

Examples

## check the function using a random sequence
id <- 'adfasdfafd'
is.nuID(id)		# FALSE

## check the function using a read nuID
seq <- 'ACGTAAATTTCAGTTTAAAACCCCCCG'
id <- seq2id(seq)
is.nuID(id)		# TRUE

lumi documentation built on Nov. 8, 2020, 5:27 p.m.