bracketMethods: Sub-setting methods for maiges objects

In maigesPack: Functions to handle cDNA microarray data, including several methods of data analysis

Description

Sub-setting methods were defined for the classes presented in this package, maiges, maigesANOVA, maigesRaw and maigesPreRaw. These methods create instances of the given class, for a subset of spots and/or arrays in a batch.

Methods

x = ANY

generic method.

x = maiges

x[i, j] extract object of class maiges for spots with indexes i and samples with indexes j.

x = maigesANOVA

x[i, j] extract object of class maigesANOVA for spots with indexes i and samples with indexes j.

x = maigesRaw

x[i, j] extract object of class maigesRaw for spots with indexes i and arrays with indexes j.

x = maigesPreRaw

x[i, j] extract object of class maigesPreRaw for spots with indexes i and arrays with indexes j.

See Also

maiges, maigesANOVA, maigesRaw and maigesPreRaw.

Examples

## Loading the dataset
data(gastro)

gastro[1:10,]
gastro[1,1]

gastro.raw[rep(TRUE, 15),]

gastro.norm[c(1,4,6), c(10, 18)]

maigesPack documentation built on Nov. 8, 2020, 6:23 p.m.