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README.md
In metagenomeSeq: Statistical analysis for sparse high-throughput sequencing
metagenomeSeq
Statistical analysis for sparse high-throughput sequencing
metagenomeSeq is designed to determine features (be it Operational Taxanomic Unit (OTU), species, etc.)
that are differentially abundant between two or more groups of multiple samples. metagenomeSeq is designed
to address the effects of both normalization and undersampling of microbial communities on disease
association detection and the testing of feature correlations.
To install the latest release version of metagenomeSeq:
if (!requireNamespace("BiocManager", quietly=TRUE))
install.packages("BiocManager")
BiocManager::install("metagenomeSeq")
To install the latest development version of metagenomeSeq:
install.packages("devtools")
library("devtools")
install_github("Bioconductor-mirror/metagenomeSeq")
Author: Joseph Nathaniel Paulson, Hisham Talukder, Mihai Pop, Hector Corrada Bravo
Maintainer: Joseph N. Paulson : jpaulson at jimmy.harvard.edu
Website: www.cbcb.umd.edu/software/metagenomeSeq
Try the metagenomeSeq package in your browser
Any scripts or data that you put into this service are public.
metagenomeSeq documentation built on Nov. 8, 2020, 5:34 p.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
metagenomeSeq
Statistical analysis for sparse high-throughput sequencing
metagenomeSeq is designed to determine features (be it Operational Taxanomic Unit (OTU), species, etc.) that are differentially abundant between two or more groups of multiple samples. metagenomeSeq is designed to address the effects of both normalization and undersampling of microbial communities on disease association detection and the testing of feature correlations.
To install the latest release version of metagenomeSeq:
if (!requireNamespace("BiocManager", quietly=TRUE))
install.packages("BiocManager")
BiocManager::install("metagenomeSeq")
To install the latest development version of metagenomeSeq:
install.packages("devtools")
library("devtools")
install_github("Bioconductor-mirror/metagenomeSeq")
Author: Joseph Nathaniel Paulson, Hisham Talukder, Mihai Pop, Hector Corrada Bravo
Maintainer: Joseph N. Paulson : jpaulson at jimmy.harvard.edu
Website: www.cbcb.umd.edu/software/metagenomeSeq
Try the metagenomeSeq package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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