biom2MRexperiment: Biom to MRexperiment objects
In metagenomeSeq: Statistical analysis for sparse high-throughput sequencing
Description
Usage
Arguments
Value
See Also
Examples
View source: R/biom2MRexperiment.R
Description
Wrapper to convert biom files to MRexperiment objects.
Usage
1
biom2MRexperiment(obj)
Arguments
obj
The biom object file.
Value
A MRexperiment object.
See Also
loadMeta loadPhenoData newMRexperiment loadBiom
Examples
1
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3
4
library(biomformat)
rich_dense_file = system.file("extdata", "rich_dense_otu_table.biom", package = "biomformat")
x = biomformat::read_biom(rich_dense_file)
biom2MRexperiment(x)
metagenomeSeq documentation built on Nov. 8, 2020, 5:34 p.m.
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Description Usage Arguments Value See Also Examples
View source: R/biom2MRexperiment.R
Description
Wrapper to convert biom files to MRexperiment objects.
Usage
1 | biom2MRexperiment(obj)
|
Arguments
obj |
The biom object file. |
Value
A MRexperiment object.
See Also
loadMeta loadPhenoData newMRexperiment loadBiom
Examples
1 2 3 4 | library(biomformat)
rich_dense_file = system.file("extdata", "rich_dense_otu_table.biom", package = "biomformat")
x = biomformat::read_biom(rich_dense_file)
biom2MRexperiment(x)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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